Search results - 293 results

The GEN-ERA toolbox: unified and reproducible workflows for research in microbial genomics

collections Cyanobacteria Genomics Gloeobacterales Metagenomics nextflow phylogenomics Phylogeny Singularity containers Workflow Abstract: Background: Microbial culture collections play a key role in taxonomy ...

Wastewater-based epidemiological surveillance- Weekly report

https://www.sciensano.be/en/biblio/wastewater-based-epidemiological-surveillance-weekly-report Keywords: applied genomics environment epidemiology Surveillance wastewater wastewater surveillance wastewater-based epidemiology Health Topics:  Health and disease monitoring Health and environment ...

Towards facilitated interpretation of shotgun metagenomics long-read sequencing data analyzed with KMA for the detection of bacterial pathogens and their antimicrobial resistance genes

transversales en génomique appliquée Transversale activiteiten in toegepaste genomica Transversal activities in applied genomics Manuscript versions:  DOI:  https://sciensano.be/en/10.3389/fmicb.2024.1336532 ...

Wastewater-based epidemiological surveillance- Methodological appendix

://www.sciensano.be/en/biblio/wastewater-based-epidemiological-surveillance-methodological-appendix Keywords: applied genomics environment epidemiology Surveillance wastewater wastewater surveillance wastewater-based epidemiology Health Topics:  Health and disease monitoring Health and environment ...

Development of a reverse transcriptase digital droplet polymerase chain reaction‐based approach for SARS‐CoV‐2 variant surveillance in wastewater

transversales en génomique appliquée Transversale activiteiten in toegepaste genomica Transversal activities in applied genomics Pathogènes alimentaires Voedselpathogenen Foodborne pathogens Épidémiologie des ...

Strain-level characterization without culture enrichment? Easing and accelerating outbreak investigation using shotgun metagenomics facilitated with nanopore adaptive sampling

–veiligheid Service:  Activités transversales en génomique appliquée Transversale activiteiten in toegepaste genomica Transversal activities in applied genomics Full text language:  English Category:  ...

RNA sequencing of avian paramyxovirus (Paramyxoviridae, Avulavirinae) isolates from wild mallards in Belgium, 2021: complete genomes and coinfections.

RNA sequencing to characterize three Avulavirinae isolates from pooled samples obtained from wild mallards in Belgium in 2021. The complete genome sequences of two avian Orthoavulavirus-1 (AOAV-1) ...

Whole-Genome Sequence Approach and Phylogenomic Stratification Improve the Association Analysis of Mutations With Patient Data in Influenza Surveillance

applied genomics Manuscript versions:  File:  Version:  Published Full text access:  Public Access Full text language:  English Category:  A1 FOS Classification:  3.04 Medical biotechnology ...

Detection of food and feed plant products obtained by targeted mutagenesis and cisgenesis

Laboratories, Volume JRC133689, Luxembourg (2023) Service:  Activités transversales en génomique appliquée Transversale activiteiten in toegepaste genomica Transversal activities in applied genomics Full text ...

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