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genotyping

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Impact of DNA extraction on whole genome sequencing analysis for characterization and relatedness of Shiga toxin-producing Escherichia coli isolates

plasmid and chromosome references); and (iii) WGS data analysis, i.e. isolate characterization (serotyping, virulence and antimicrobial resistance genotyping) and phylogenetic relatedness (core genome ...

Whole-genome sequencing of serotype 4b isolated from ready-to-eat lentil salad in Algiers, Algeria.

Microbes New Infect, Volume 33 (2020) Abstract: is a Gram-positive food-borne pathogen causing a serious threat for public health. Here we announce the whole genome sequence (3 011 693 bp) of serotype 4b, ...

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