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Zoekresultaten - 41 results
Assessing the authenticity and purity of a commercial Bacillus thuringiensis bioinsecticide through whole genome sequencing and metagenomics approaches
Publication Type: Peer reviewed scientific article Authors: Van Laere, Yari; Fraiture, Marie-Alice; Gobbo, Andrea; Sigrid C.J. De Keersmaecker *; Marchal, Kathleen; Nancy Roosens; Vanneste, Kevin ...
Using a combination of short- and long-read sequencing to investigate the diversity in plasmid- and chromosomally encoded extended-spectrum beta-lactamases (ESBLs) in clinical Shigella and Salmonella isolates in Belgium
Publication Type: Peer reviewed scientific article Authors: Berbers, Bas; Vanneste, Kevin; Roosens, Nancy H. C. J.; Marchal, Kathleen; Pieter-Jan Ceyssens *; De Keersmaecker, Sigrid C. J. Source: ...
Benchmarking bacterial taxonomic classification using nanopore metagenomics data of several mock communities
Publication Type: Peer reviewed scientific article Authors: Van Uffelen, Alexander; Posadas, Andrés; Roosens, Nancy H. C.; Marchal, Kathleen; De Keersmaecker, Sigrid C. J.; Vanneste, Kevin Source: ...
Strain-level characterization without culture enrichment? Easing and accelerating outbreak investigation using shotgun metagenomics facilitated with nanopore adaptive sampling
Publication Type: Scientific poster, presentation or proceeding Authors: Florence E Buytaers; Bavo Verhaegen; Tom Van Nieuwenhuysen; Nancy Roosens; Kevin Vanneste; Kathleen Marchal; Sigrid C.J. De ...
Transforming Shiga toxin-producing surveillance through whole genome sequencing in food safety practices.
Publication Type: Peer reviewed scientific article Authors: Nouws, Stéphanie; Bavo Verhaegen *; Denayer, Sarah; Florence Crombé *; Denis Piérard; Bert Bogaerts *; Kevin Vanneste *; Kathleen Marchal ...
Development of a portable on-site applicable metagenomic data generation workflow for enhanced pathogen and antimicrobial resistance surveillanceAbstract
Publication Type: Peer reviewed scientific article Authors: Bram Bloemen; Mathieu Gand; Kevin Vanneste; Marchal, Kathleen; Nancy Roosens; Sigrid C.J. De Keersmaecker Source: Scientific Reports, ...
A shotgun metagenomics approach to detect and characterize unauthorized genetically modified microorganisms in microbial fermentation products
Kathleen Marchal; Nancy Roosens; Sigrid C.J. De Keersmaecker Source: ONE Conference 2022, Issue EFSA (2022) Service: Activités transversales en génomique appliquée Transversale activiteiten in toegepaste ...
Shotgun metagenomics as a ONE Health tool for better protecting human health
Piérard; Bert Bogaerts; Kathleen Marchal; The FARMED consortium; Nancy Roosens; Kevin Vanneste; Sigrid C.J. De Keersmaecker Source: EFSA One, Issue EFSA (2022) Abstract: Introduction: Open approaches to ...
Metagenomics to Detect and Characterize Viruses in Food Samples at Genome Level? Lessons Learnt from a Norovirus Study
Publication Type: Peer reviewed scientific article Authors: Florence E Buytaers; Bavo Verhaegen; Mathieu Gand; Jolien D'aes; Kevin Vanneste; Nancy Roosens; Kathleen Marchal; Sarah Denayer; ...
Application of a strain-level shotgun metagenomics approach on food samples: resolution of the source of a Salmonella food-borne outbreak
Pochet, Brigitte; Vera Cantaert; Marchal, Kathleen; Sarah Denayer; Sigrid C.J. De Keersmaecker Source: Microbial Genomics, Volume 7, Issue 4 (2021) Keywords: food surveillance Metagenomics outbreak ...