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Retrospective surveillance of viable Bacillus cereus group contaminations in commercial food and feed vitamin B2 products sold on the Belgian market using whole-genome sequencing
whole-genome sequencing (WGS) and subsequently characterized in terms of sequence type (ST), virulence gene profile, antimicrobial resistance (AMR) gene profile, plasmid content, and phylogenomic relationships. ...
Multicentric Analysis of the Species Distribution and Antifungal Susceptibility of Clinical Isolates from Aspergillus Section Circumdati
Aspergillus ochraceopetaliformis Aspergillus sclerotiorum Aspergillus section Circumdati Aspergillus westerdijkiae azole resistance MALDI-TOF mass spectrometry Abstract: The clinical involvement and antifungal ...
A genomic appraisal of invasive Salmonella Typhimurium and associated antibiotic resistance in sub-Saharan Africa.
Drug Resistance, Microbial Genomics Humans Salmonella Infections Salmonella typhimurium Abstract: Invasive non-typhoidal Salmonella (iNTS) disease manifesting as bloodstream infection with high mortality ...
Animal sources of antimicrobial-resistant bacterial infections in humans: a systematic review
Monteiro Pires; Lapo Mughini-Gras; Ben Huntington; Jonathan Rushton; David Pigott; Brecht Devleesschauwer Source: Epidemiol Infect, Volume 151 (2023) Keywords: Antibiotic resistance Antimicrobial resistance ...
Whole-Genome Sequencing-Based Screening of MRSA in Patients and Healthcare Workers in Public Hospitals in Benin.
Staphylococcus aureus whole-genome sequencing. Abstract: Methicillin-resistant (MRSA) constitutes a serious public health concern, with a considerable impact on patients’ health, and substantial healthcare costs. ...
Transforming Shiga toxin-producing surveillance through whole genome sequencing in food safety practices.
Nancy Roosens *; Sigrid C.J. De Keersmaecker * Source: Front Microbiol, Volume 14 (2023) Keywords: Food Safety implementation Shiga toxin-producing Escherichia coli Surveillance whole genome sequencing ...
Characterization of a Bacteriophage GEC_vB_Bfr_UZM3 Active against.
drug-resistant human pathogens, but cases of the refractory infections, caused by strains that are not susceptible to the common antibiotic regimes established for have been more frequently reported. ...
Targeted Chromosomal Barcoding Establishes Direct Genotype-Phenotype Associations for Antibiotic Resistance in Mycobacterium abscessus.
anticipate a future when a plethora of antibiotic-resistant strains will be isolated and sequenced. However, in the era of whole-genome sequencing, one of the challenges is to unequivocally assign a biological ...
Development of strain-level shotgun metagenomics approaches to detect and characterize microbiological contaminants in the context of food safety
It was proven that whole genome sequencing has a higher resolution than any combination of tests carried out so far. But the isolation is not always possible, and it is time-consuming. A new method ...
Using a combination of short and long read sequencing to investigate the diversity in plasmid- and chromosomally encoded extended-spectrum-beta-lactamases (ESBL) in clinical Shigella and Salmonella isolates in Belgium
Volume 9:000925, Number 23 (2023) Keywords: Antimicrobial resistance extended spectrum beta-lactamase Plasmids Salmonella Shigella whole genome sequencing. Service: Activités transversales en génomique ...