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2017
Development of a real-time PCR test for the geno-serotyping of Salmonella Paratyphi B and its variant Java, Gand, Mathieu, Mattheus Wesley, Saltykova Assia, Roosens Nancy, Dierick Katelijne, Marchal Kathleen, De Keersmaecker Sigrid C. J., and Bertrand Sophie , BSFM conference, 2017, Brussels, Belgium, (2017)
Discrimination of three genetically close Aspergillus species by using high resolution melting analysis applied to indoor air as case study., Libert, Xavier, Packeu Ann, Bureau Fabrice, Roosens Nancy, and De Keersmaecker Sigrid C. J. , BMC Microbiol, 2017 Apr 04, Volume 17, Issue 1, p.84, (2017)
Evaluation of SNPs based on DNA extracted from urine as part of the development and use of a kit of non-invasive biomarkers to monitor respiratory health of young children, Nauwelaerts, S., De Cremer Koen, Bernard Alfred, Roosens Nancy, and De Keersmaecker Sigrid C. J. , qPCR dPCR & NGS 2017 Symposium, 03/04/2017, Freising, Germany , (2017)
Great diversity in Mcr-1 encoding plasmids among human E. coli and Salmonella spp. isolates in Belgium , Ceyssens, Pieter-Jan, Bogaerts Pierre, De Keersmaecker Sigrid C. J., Bertrand Sophie, and Glupzynski Youri , ECCMID 2017, 17/05/2017, Volume 1, Issue ESCMID, Vienna, Austria, (2017)
Molecular Subtyping of Salmonella Typhimurium with Multiplex Oligonucleotide Ligation-PCR (MOL-PCR)., Wuyts, Véronique, Mattheus Wesley, Roosens Nancy, Marchal Kathleen, Bertrand Sophie, and De Keersmaecker Sigrid C. J. , Methods Mol Biol, 2017, Volume 1616, p.39-69, (2017)
Salmonella infections: identification techniques for successful investigations, Bertrand, Sophie, Mattheus Wesley, Ceyssens Pieter-Jan, Gand Mathieu, Vanhoof Raymond, Botteldoorn N, Denayer Sarah, Roosens Nancy, and De Keersmaecker Sigrid C. J. , Labinfo, 2017, Volume 16, Number 47, Belgium, (2017)
2016
The added value of whole genome sequencing for the development of a specific detection method for an EU-unauthorized genetically modified Bacillus subtilis overproducing riboflavin, De Keersmaecker, Sigrid C. J., Barbau-Piednoir E., Delvoye M., Gau C., Philipp P., and Roosens Nancy , Technical Meeting on the impact of Whole Genome Sequencing (WGS) on food safety management: within a one health framework, 0/0/2016, Issue FAO/GMI, NA, (2016)
The Belgian NGS guidelines for (haemato)-oncology: 2016- version 01, Hébrant, Aline, Froyen G., Maes B., Salgado R., Le Mercier M., D'Haene N., De Keersmaecker Sigrid C. J., Claes K., Van der Meulen J., Aftimos P., et al. , BSMO J, 0/0/2016, Volume /, (2016)
Data analysis associated with the use of whole genome sequencing for subtyping of pathogenic microorganisms, Salmonella Typhimurium as a case study, Saltykova, Assia, Wuyts V., Bertrand Sophie, Roosens Nancy, Marchal K., and De Keersmaecker Sigrid C. J. , Applied Bioinformatics in Life Sciences, 17/3/2016, Issue VIB, NA, (2016)
Development and implementation of a transversal NGS & bioinformatics platform at the Belgian Institute of Public Health, Vanneste, Kevin, Bogaerts Bert, Fu Q., Winand Raf, Romeu A.G., Brown I., De Keersmaecker Sigrid C. J., and Roosens Nancy , Applied Bioinformatics in Life Sciences, 17/3/2016, Issue VIB, NA, (2016)
Development and implementation of a transversal NGS & bioinformatics platform at the Belgian Institute of Public Health: deployment of user-friendly pipelines for routine use, Vanneste, Kevin, Fu Q., Bogaerts Bert, Winand Raf, Romeu A.G., Brown I., Van Braekel Julien, De Keersmaecker Sigrid C. J., and Roosens Nancy , 15th European Conference on Computational Biology, 0/0/2016, Issue VU Amsterdam, TU Delft, DTL, BioSB, UMC Utrecht, NA, (2016)
Development and use of non-invasive biomarkers to monitor respiratory health of young children, Nauwelaerts, S., De Cremer Koen, Denis Olivier J., Bernard A., De Keersmaecker Sigrid C. J., and Roosens Nancy , Institute Pasteur International Network Scientific Symposium, 1/7/2016, Issue Institut Pasteur, Paris, France, (2016)
Development of a Luminex xTAG® assay for cost-effective multiplex detection of β-lactamases in Gram-negative bacteria., Ceyssens, Pieter-Jan, Garcia-Graells Cristina, Fux Frédéric, Botteldoorn N, Mattheus Wesley, Wuyts Véronique, De Keersmaecker Sigrid C. J., Dierick Katelijne, and Bertrand Sophie , J Antimicrob Chemother, 2016 Sep, Volume 71, Issue 9, p.2479-83, (2016)
Development of a molecular alternative to classical microbiological subtyping methods, Salmonella phage typing as a case study, Wuyts, V., Bertrand Sophie, Marchal K., Roosens Nancy, and De Keersmaecker Sigrid C. J. , 30/6/2016, Number 100, Brussels, Belgium, p.96 - 100, (2016)
Development of xMAP and xTAG Luminex assays for public health surveillance, De Keersmaecker, Sigrid C. J. , xMAP® CONNECT 2016 - Sharing Multiplex Solutions, 0/0/2016, Issue Luminex Coorporation, NA, (2016)
FabR regulates Salmonella biofilm formation via its direct target FabB., Hermans, Kim, Roberfroid Stefanie, Thijs Inge M., Kint Gwendoline, De Coster David, Marchal Kathleen, Vanderleyden Jos, De Keersmaecker Sigrid C. J., and Steenackers Hans P. , BMC Genomics, 2016 Mar 22, Volume 17, p.253, (2016)
Genetic relatedness and virulence profile of Shiga toxin-producing Escherichia coli isolated from food in Belgium, Verhaegen, Bavo, Barbau-Piednoir E., De Zutter L., Van Damme Inge, Denayer Sarah, De Keersmaecker Sigrid C. J., and Heyndrickx M. , Twenty-first Conference on Food Microbiology, 0/0/2016, Issue BSFM, NA, (2016)
Goal 4: Develop and implement new technologies and methods to improve WIV-ISP's responsiveness to public health threats, Sneyers, Myriam, Roosens Nancy, and De Keersmaecker Sigrid C. J. , 30/6/2016, Number 19, Brussels, Belgium, p.114, (2016)
Guest lecture molecular- microbial techniques: the use of whole genome sequencing (WGS) for typing of bacterial pathogenic isolates, De Keersmaecker, Sigrid C. J. , Course Bio-engineers - Molecular-Microbial techniques - Prof. M. Uyttendaele, 29/11/2016, Issue UGent, NA, (2016)
A molecular approach for the rapid, selective and sensitive detection of Exophiala jeanselmei in environmental samples: development and performance assessment of a real-time PCR assay, Libert, X, Chasseur Camille, Packeu Ann, Bureau F, Roosens Nancy, and De Keersmaecker Sigrid C. J. , Appl Microbiol Biotechnol, 2016 Feb, Volume 100, Issue 3, Number 1392, p.1377-92, (2016)
Molecular subtyping of Salmonella Typhimurium with multiplex oligonucleotide ligation-PCR (MOL-PCR), Wuyts, V., Mattheus Wesley, Roosens Nancy, Marchal K., Bertrand Sophie, and De Keersmaecker Sigrid C. J. , Diagnostic Bacteriology Protocols, 0/0/2016, Number -, Totowa, New Jersey, p.-, (2016)
Optimized MOL-PCR for Characterization of Microbial Pathogens, Wuyts, Véronique, Roosens Nancy, Bertrand Sophie, Marchal Kathleen, and De Keersmaecker Sigrid C. J. , Curr Protoc Cytom, 2016 Jan 06, Volume 75, Number 13.15.15, p.13.15.1-13.15.15, (2016)
Statistical framework for detection of Genetically Modified Organisms based on Next Generation Sequencing, Willems, Sander, Fraiture Marie-Alice, Deforce Dieter, De Keersmaecker Sigrid C. J., Herman Philippe, De Loose Marc, Ruttink Tom, Van Nieuwerburgh Filip, and Roosens Nancy , Food Chemistry, 21/07/2015, Volume 192, Issue 1, Number 798, (2016)
The use of whole genome sequencing (WGS) for typing of bacterial pathogenic isolates, De Keersmaecker, Sigrid C. J. , 21st Conference on Food Microbiology, 0/0/2016, Issue BSFM, NA, (2016)
Whole genome sequencing to help enforcement laboratories for the development of detection method for an EU-unauthorized genetically modified Bacillus subtilis overproducing riboflavin, De Keersmaecker, Sigrid C. J., Papazova N., and Roosens Nancy , LabInfo, 16/7/2016, Volume 15, Issue Jul-16, Number 31, p.29 - 31, (2016)

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