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2024
High pathogenic avian influenza A(H5) viruses of clade 2.3.4.4b in Europe-Why trends of virus evolution are more difficult to predict., Fusaro, Alice, Zecchin Bianca, Giussani Edoardo, Palumbo Elisa, Montserrat Agüero-García, Bachofen Claudia, Bálint Ádám, Fereshteh Banihashem, Banyard Ashley C., Beerens Nancy, et al. , Virus Evol, 2024, Volume 10, Issue 1, (2024)
An interlaboratory proficiency test using metagenomic sequencing as a diagnostic tool for the detection of RNA viruses in swine fecal material., Liu, Lihong, Mikhayil Hakhverdyan, Wallgren Per, Vanneste Kevin, Qiang Fu, Pierrick Lucas, Blanchard Yannick, de Graaf Miranda, Oude Munnink Bas B., van Boheemen Sander, et al. , Microbiol Spectr, 2024 Oct 03, Volume 12, Issue 10, (2024)
2023
Combined Phylogeographic Analyses and Epidemiologic Contact Tracing to Characterize Atypically Pathogenic Avian Influenza (H3N1) Epidemic, Belgium, 2019., Van Borm, Steven, Boseret Geraldine, Dellicour Simon, Steensels Mieke, Roupie Virginie, Vandenbussche Frank, Mathijs Elisabeth, Vilain Aline, Driesen Michèle, Dispas Marc, et al. , Emerg Infect Dis, 2023 Feb, Volume 29, Issue 2, (2023)
Combined Phylogeographic Analyses and Epidemiologic Contact Tracing to Characterize Atypically Pathogenic Avian Influenza (H3N1) Epidemic, Belgium, 2019, Van Borm, Steven, Boseret Geraldine, Dellicour Simon, Steensels Mieke, Roupie Virginie, Vandenbussche Frank, Mathijs Elisabeth, Vilain Aline, Driesen Michèle, Dispas Marc, et al. , Emerging Infectious Diseases, Jan-02-2023, Volume 29, Issue 2, (2023)
Complete genome reconstruction of the global and European regional dispersal history of the lumpy skin disease virus., Van Borm, Steven, Dellicour Simon, Martin Darren P., Lemey Philippe, Agianniotaki Eirini I., Chondrokouki Eleni D., Dejan Vidanovic, Vaskovic Nikola, Petroviċ Tamaš, Laziċ Sava, et al. , J Virol, 2023 Oct 31, (2023)
Complete genome reconstruction of the global and European regional dispersal history of the lumpy skin disease virus., Van Borm, Steven, Dellicour Simon, Martin Darren P., Lemey Philippe, Agianniotaki Eirini I., Chondrokouki Eleni D., Dejan Vidanovic, Vaskovic Nikola, Petroviċ Tamaš, Laziċ Sava, et al. , J Virol, 2023 Oct 31, (2023)
RNA sequencing of avian paramyxovirus (Paramyxoviridae, Avulavirinae) isolates from wild mallards in Belgium, 2021: complete genomes and coinfections., Van Borm, Steven, Roupie Virginie, Linden A, Vangeluwe D, De Waele V, Lambrecht Bénédicte, and Steensels Mieke , Virus Genes, 2023 Oct, Volume 59, Issue 5, (2023)
2022
Has Epizootic Become Enzootic? Evidence for a Fundamental Change in the Infection Dynamics of Highly Pathogenic Avian Influenza in Europe, 2021., Pohlmann, Anne, King Jacqueline, Fusaro Alice, Zecchin Bianca, Banyard Ashley C., Brown Ian H., Byrne Alexander M. P., Beerens Nancy, Yuan Liang, Heutink Rene, et al. , mBio, 2022 Aug 30, Volume 13, Issue 4, (2022)
A robust, cost-effective and widely applicable whole-genome sequencing protocol for capripoxviruses, Mathijs, Elisabeth, Haegeman Andy, De Clercq Kris, Van Borm Steven, and Vandenbussche Frank , Journal of Virological Methods, Jan-01-2022, (2022)
2021
Coding-Complete Sequences of Recombinant Lumpy Skin Disease Viruses Collected in 2020 from Four Outbreaks in Northern Vietnam., Mathijs, Elisabeth, Vandenbussche Frank, Long Nguyen, Aerts Laetitia, Tho Nguyen, De Leeuw Ilse, Minh Quang, Dang Nguyen, Hoang, Philips Wannes, Vui Dam, Thi, et al. , Microbiol Resour Announc, 2021 Dec 02, Volume 10, Issue 48, (2021)
Key considerations for the implementation of high throughput sequencing based metagenomics (mNGS) in diagnostic clinical, food and veterinary labs : a no-nonsense pointer. the Metastava consortium, Van Borm, Steven, Vandenbussche Frank, De Clercq Kris, Haegeman Andy, De Keersmaecker Sigrid C. J., Vanneste Kevin, Peeters Michael, Van Gucht Steven, Blanchard Yannick, Pavio Nicole, et al. , 2021, (2021)
Metagenomic sequencing determines complete infectious bronchitis virus (avian Gammacoronavirus) vaccine strain genomes and associated viromes in chicken clinical samples., Van Borm, Steven, Steensels Mieke, Mathijs Elisabeth, Vandenbussche Frank, van den Berg Thierry, and Lambrecht Bénédicte , Virus Genes, 2021 Dec, Volume 57, Issue 6, (2021)
Molecular and virological characterization of the first poultry outbreaks of Genotype VII.2 velogenic avian orthoavulavirus type 1 (NDV) in North-West Europe, BeNeLux, 2018., Steensels, Mieke, Van Borm Steven, Mertens Ingeborg, Houdart Philippe, Rauw Fabienne, Roupie Virginie, Snoeck Chantal J., Bourg Manon, Losch Serge, Beerens Nancy, et al. , Transbound Emerg Dis, 2021 Jul, Volume 68, Issue 4, (2021)
Molecular and virological characterization of the first poultry outbreaks of Genotype VII.2 velogenic avian orthoavulavirus type 1 (NDV) in North‐West Europe, BeNeLux, 2018, Steensels, Mieke, Van Borm Steven, Mertens Ingeborg, Houdart Philippe, Rauw Fabienne, Roupie Virginie, Snoeck Chantal J., Bourg Manon, Losch Serge, Beerens Nancy, et al. , Transboundary and Emerging Diseases, Jan-07-2021, Volume 68, Issue 4, (2021)
Nearly Complete Genome Sequences of Two Bluetongue Viruses Isolated during the 2020 Outbreak in the Grand Duchy of Luxembourg., Vandenbussche, Frank, Bourg Manon, Mathijs Elisabeth, Lefebvre David, De Leeuw Ilse, Haegeman Andy, Aerts Laetitia, Van Borm Steven, and De Clercq Kris , Microbiol Resour Announc, 2021 Apr 08, Volume 10, Issue 14, (2021)
2020
Atypical Pathogenicity of Avian Influenza (H3N1) Virus Involved in Outbreak, Belgium, 2019, Steensels, Mieke, Lagacé-Wiens Philippe, Van Borm Steven, van den Berg Thierry, Corrigan Tim, Roupie Virginie, Rauw Fabienne, and Lambrecht Bénédicte , Emerging Infectious Diseases, 08/2020, Volume 26, Issue 8, (2020)
Atypical Pathogenicity of Avian Influenza (H3N1) Virus Involved in Outbreak, Belgium, 2019, Steensels, Mieke, Lagacé-Wiens Philippe, Van Borm Steven, van den Berg Thierry, Cargnel Mickael, Roupie Virginie, Rauw Fabienne, and Lambrecht Bénédicte , Emerging Infectious Diseases, Jan-08-2020, Volume 26, Issue 8, (2020)
Complete Coding Sequence of a Lumpy Skin Disease Virus from an Outbreak in Bulgaria in 2016., Mathijs, Elisabeth, Vandenbussche Frank, Ivanova Emiliya, Haegeman Andy, Aerts Laetitia, De Leeuw Ilse, Van Borm Steven, and De Clercq Kris , Microbiol Resour Announc, 2020 Oct 22, Volume 9, Issue 43, (2020)
Complete Coding Sequence of a Lumpy Skin Disease Virus Strain Isolated during the 2016 Outbreak in Kazakhstan., Mathijs, Elisabeth, Vandenbussche Frank, Saduakassova Meruyert, Kabduldanov Tursyn, Haegeman Andy, Aerts Laetitia, Kyzaibayev Taskyn, Sultanov Akhmetzhan, Van Borm Steven, and De Clercq Kris , Microbiol Resour Announc, 2020 Jan 23, Volume 9, Issue 4, (2020)
Evaluation of a commercial exogenous internal process control for diagnostic RNA virus metagenomics from different animal clinical samples, Van Borm, Steven, Qiang Fu, Winand Raf, Vanneste Kevin, Hakhverdyan Mikhayil, Höper Dirk, and Vandenbussche Frank , Journal of Virological Methods, Jan-09-2020, Volume 283, (2020)
Increased viral read counts and metagenomic full genome characterization of porcine astrovirus 4 and Posavirus 1 in sows in a swine farm with unexplained neonatal piglet diarrhea, Van Borm, Steven, Vanneste Kevin, Qiang Fu, Maes Dominiek, Schoos Alexandra, Vallaey Eline, and Vandenbussche Frank , Virus Genes, Jan-12-2020, Volume 56, Issue 6, (2020)
2018
Complete coding sequence of a novel picorna-like virus in a blackbird infected with Usutu virus., Van Borm, Steven, Steensels Mieke, Mathijs Elisabeth, Kwe Yinda Claude, Matthijnssens Jelle, and Lambrecht Bénédicte , Arch Virol, 2018 Jun, Volume 163, Issue 6, (2018)
Complete Genome Sequences of Five Foot-and-Mouth Disease Viruses of Serotype A Isolated from Cattle in Nigeria between 2013 and 2015., Vandenbussche, Frank, Mathijs Elisabeth, Ularamu Hussaini G., Ehizibolo David O., Haegeman Andy, Lefebvre David, De Vleeschauwer Annebel, Van Borm Steven, and De Clercq Kris , Genome Announc, 2018 Feb 15, Volume 6, Issue 7, (2018)
2017
Complete Coding Sequence of Usutu Virus Strain Gracula religiosa/U1609393/Belgium/2016 Obtained from the Brain Tissue of an Infected Captive Common Hill Myna (Gracula religiosa), Van Borm, Steven, Lambrecht Bénédicte, Vandenbussche Frank, and Steensels Mieke , Genome Announcements, Nov-03-2018, Volume 5, Issue 12, (2017)
Complete Coding Sequence of Usutu Virus Strain Gracula religiosa/U1609393/Belgium/2016 Obtained from the Brain Tissue of an Infected Captive Common Hill Myna (Gracula religiosa), Van Borm, Steven, Lambrecht Bénédicte, Vandenbussche Frank, and Steensels Mieke , Genome Announcements, Nov-03-2018, Volume 5, Issue 12, (2017)

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